Curriculum Vitae

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Education

  • Ph.D. Chemical Engineering
    Graduate emphasis in Computational Science & Engineering (High Performance Computing)
    University of California Santa Barbara
    Santa Barbara, CA, USA
  • M.Tech & B.Tech (Hons.) Chemical Engineering, Integrated Dual Degree
    Indian Institute of Technology Kharagpur
    Kharagpur, WB, India

Experiences

  • Principal Protein Design Scientist
    Multispecific pharmacokinetic modeling, MLOps pipelines for biophysical property prediction, and in-silico display library design.
    Amgen Inc.
    South San Francisco, CA, USA
  • Senior Protein Design Scientist
    Combinatorial protein library design for multispecific antibody engineering.
    Amgen Inc.
    South San Francisco, CA, USA
  • Protein Design Scientist
    Computational PEGylation scanning for peptide half-life extension; biologics design with structure prediction and active learning.
    Novo Nordisk Research Center Seattle
    Seattle, WA, USA
  • Postdoctoral Scholar — Andrej Sali lab
    Nanobody–spike biophysics, crosslink-guided integrative modeling, and multimodal whole-cell models of pancreatic beta cells.
    University of California San Francisco
    San Francisco, CA, USA
  • Graduate Research — M. Scott Shell lab
    Coarse-grained MD for phase separation and protein folding; HPC cluster administration.
    University of California Santa Barbara
    Santa Barbara, CA, USA

Skills

Protein Design

Rosetta, RFDiffusion + ProteinMPNN + AlphaFold, Protein Language Models (ESM2, Amplify)

Molecular Modeling

openMM, LAMMPS, GROMACS, IMP, Modeller, UCSF ChimeraX, PyMOL

ML / MLOps

PyTorch, PyTorch-Lightning, Tensorflow-probability, PyMC3, MLFlow, AWS Batch

Programming Languages

Python (+Cython ~10k+ lines), Fortran-90 (~1k+ lines), C++ (~4k+ lines), Bash